Mock sample for your project: OPTIMADE API
Integrate with "OPTIMADE API" from optimade.local in no time with Mockoon's ready to use mock sample
OPTIMADE API
optimade.local
Version: 1.1.0
Speed up your application development by using "OPTIMADE API" ready-to-use mock sample. Mocking this API will allow you to start working in no time. No more accounts to create, API keys to provision, accesses to configure, unplanned downtime, just work.
It also improves your integration tests' quality and reliability by accounting for random failures, slow response time, etc.
Description
The Open Databases Integration for Materials Design (OPTIMADE) consortium aims to make materials databases interoperational by developing a common REST API.
This specification is generated using optimade-python-tools v0.16.0.
Other APIs in the same category
Karnataka Industrial Areas Development Board, Karnataka
apisetu.gov.in
KIADB, AP (http://en.kiadb.in/) is the online s for Karnataka State Govt. Certain documents issued by it (e.g. Allotment Letter,Building Plan, Water Supply Connection, NOC For Banks etc) are made available in citizens' DigiLocker accounts.
Karnataka Department of Transport, Karnataka
apisetu.gov.in
Driving License (DL) & Vehicle Registration Certificate (RC) as issued by Transport Department, Government of Karnataka (http://transport.karnataka.gov.in) can be pulled by citizens into their DigiLocker accounts.
Revenue Department - Land Records, Karnataka
apisetu.gov.in
APIs provided by Revenue Department - Land Records, Karnataka.
Gujarat Vidyapith, Ahmedabad
apisetu.gov.in
Gujarat Vidyapith, Ahmedabad (http://www.gujaratvidyapith.org/) is issuing Degree certificates through DigiLocker. These can be pulled by students into their DigiLocker accounts. Currently, data for the year 2019 is made available by Gujarat Vidyapith.
Reisezentren-API
deutschebahn.com
This REST-API enables you to query information about travel centers in Germany.
Transport Department, Meghalaya
apisetu.gov.in
Driving License (DL) and Vehicle Registration Certificate (RC) of the State, as available on Parivahan Sewa (http://parivahan.co.in/) of Ministry of Road Transport and Highways, are available on DigiLocker. Citizens can pull these documents into their DigiLocker accounts.
CROssBAR Data API
ebi.ac.uk
About CROssBAR & data
CROssBAR: Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations
CROssBAR is a comprehensive system that integrates large-scale biomedical data from various resources e.g UniProt, ChEMBL, Drugbank, EFO, HPO, InterPro & PubChem and stores them in a new NoSQL database, enrich these data with deep learning based prediction of relations between numerous biomedical entities, rigorously analyse the enriched data to obtain biologically meaningful modules and display them to the user via easy to interpret, interactive and heterogeneous knowledge graphs.
CROssBAR platform exposes a set of 12 endpoints to query data stored in the CROssBAR database. These endpoints help the user to find data of interest using different parameters provided by the API endpoint.
For example,
https://www.ebi.ac.uk/tools/crossbar/proteins?accession=A0A023GRW5 -> will provide protein information about accession 'A0A023GRW5' including its interactions, functions, cross-references, variations and more.
https://www.ebi.ac.uk/tools/crossbar/activities?moleculeChemblId=CHEMBL465983 -> will provide ChEMBL bio-interactions related information including targets and bio-activity measurements associated with molecule chembl id 'CHEMBL465983'
Knowledge graphs
Another use case of CROssBAR's API endpoints is in building knowledge graphs. These endpoints can be weaved together (output from one API endpoint fed as input to another API endpoint) programmatically to link nodes like protein, disease, drugs etc. as nodes of the graph. The endpoints are designed to be independent from each other which allows users the flexibility to drive biological networks from any facet e.g drug-centric, disease-centric, gene-centric etc. Our service for knowledge graph construction is available at https://crossbar.kansil.org.
An example for the part of the background queries on the CROssBAR API during the construction of a knowledge graph,
(with the aim of keeping the example simple, we have only included the processes related to pathways, genes/proteins and drugs/compounds)
In this example, we would like to find bio-active compounds (with a pChEMBL value threshold of at least 6.0) & drugs targeting all proteins belonging to "WNT ligand biogenesis and trafficking" pathway (based on Reactome pathway annotations).
This can be achieved by using endpoints listed on this swagger documentation as illustrated in following steps-
Find bio-active compounds (with a pChEMBL value threshold of at least 6.0) & drugs targeting all proteins belonging to "WNT ligand biogenesis and trafficking" pathway (based on Reactome annotations)
This can be achieved by using endpoints listed on this swagger documentation as illustrated in following steps-
Get all proteins from â/proteinsâ API endpoint which have a reactome pathway name equal to "WNT ligand biogenesis and trafficking".
From the collection of uniprot protein accessions collected from step 1 above, we query â/targetsâ API endpoint to obtain the âtargetchemblidâs of these proteins.
From the collection of targetchemblids collected from step 2 above, we query â/activitiesâ API endpoint with pChEMBL value >=6, to obtain the âmoleculechemblidâs of the molecules that we need.
From the collection of uniprot protein accessions collected from step 1 above, we find out Drug names and ids from the â/drugsâ API endpoint that targets our proteins.
From the collection of âmoleculechemblidâs obtained in step3, we query â/moleculesâ endpoint to get the compounds that are interacting with the genes/proteins belonging to the âWNT ligand biogenesis and traffickingâ pathway.
CROssBAR: Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations
CROssBAR is a comprehensive system that integrates large-scale biomedical data from various resources e.g UniProt, ChEMBL, Drugbank, EFO, HPO, InterPro & PubChem and stores them in a new NoSQL database, enrich these data with deep learning based prediction of relations between numerous biomedical entities, rigorously analyse the enriched data to obtain biologically meaningful modules and display them to the user via easy to interpret, interactive and heterogeneous knowledge graphs.
CROssBAR platform exposes a set of 12 endpoints to query data stored in the CROssBAR database. These endpoints help the user to find data of interest using different parameters provided by the API endpoint.
For example,
https://www.ebi.ac.uk/tools/crossbar/proteins?accession=A0A023GRW5 -> will provide protein information about accession 'A0A023GRW5' including its interactions, functions, cross-references, variations and more.
https://www.ebi.ac.uk/tools/crossbar/activities?moleculeChemblId=CHEMBL465983 -> will provide ChEMBL bio-interactions related information including targets and bio-activity measurements associated with molecule chembl id 'CHEMBL465983'
Knowledge graphs
Another use case of CROssBAR's API endpoints is in building knowledge graphs. These endpoints can be weaved together (output from one API endpoint fed as input to another API endpoint) programmatically to link nodes like protein, disease, drugs etc. as nodes of the graph. The endpoints are designed to be independent from each other which allows users the flexibility to drive biological networks from any facet e.g drug-centric, disease-centric, gene-centric etc. Our service for knowledge graph construction is available at https://crossbar.kansil.org.
An example for the part of the background queries on the CROssBAR API during the construction of a knowledge graph,
(with the aim of keeping the example simple, we have only included the processes related to pathways, genes/proteins and drugs/compounds)
In this example, we would like to find bio-active compounds (with a pChEMBL value threshold of at least 6.0) & drugs targeting all proteins belonging to "WNT ligand biogenesis and trafficking" pathway (based on Reactome pathway annotations).
This can be achieved by using endpoints listed on this swagger documentation as illustrated in following steps-
Find bio-active compounds (with a pChEMBL value threshold of at least 6.0) & drugs targeting all proteins belonging to "WNT ligand biogenesis and trafficking" pathway (based on Reactome annotations)
This can be achieved by using endpoints listed on this swagger documentation as illustrated in following steps-
Get all proteins from â/proteinsâ API endpoint which have a reactome pathway name equal to "WNT ligand biogenesis and trafficking".
From the collection of uniprot protein accessions collected from step 1 above, we query â/targetsâ API endpoint to obtain the âtargetchemblidâs of these proteins.
From the collection of targetchemblids collected from step 2 above, we query â/activitiesâ API endpoint with pChEMBL value >=6, to obtain the âmoleculechemblidâs of the molecules that we need.
From the collection of uniprot protein accessions collected from step 1 above, we find out Drug names and ids from the â/drugsâ API endpoint that targets our proteins.
From the collection of âmoleculechemblidâs obtained in step3, we query â/moleculesâ endpoint to get the compounds that are interacting with the genes/proteins belonging to the âWNT ligand biogenesis and traffickingâ pathway.
National Institute of Technology, Patna
apisetu.gov.in
National Institute of Technology, Patna (http://www.nitp.ac.in/) is issuing Degree certificates through DigiLocker. These can be pulled by students into their DigiLocker accounts. Currently, data for the year 2019 and 2020 is made available by National Institute of Technology.
Directorate of Information Technology, Government of Tripura, Tripura
apisetu.gov.in
eDistrict Tripura (http://edistrict.tripura.gov.in/) is the online service delivery portal for TripuraState Govt. Certain documents issued by it (e.g. Income, Caste Certificates etc) can be pulled into citizens' DigiLocker accounts.
Institute of Company Secretaries of India
apisetu.gov.in
Institute of Company Secretaries of India is available on DigiLocker. ID Card is available for candidates to pull into their DigiLocker account. ICSI members can also pull their ACS certificates into their DigiLocker account.
BC Laws
BC Laws is an electronic library providing free public access to the laws of British Columbia. BC Laws is hosted by the Queen's Printer of British Columbia and published in partnership with the Ministry of Justice and the Law Clerk of the Legislative Assembly.BC Laws contains a comprehensive collection of BC legislation and related materials. It is available on the internet in two forms:First: The library is available as a web site in which users can browse and search the laws of British Columbia.Second: The library is available as a portal to legislation in raw XML data format, accessible via the BC Laws API2. This direct access to raw data is intended to enable third parties to build or add their own custom applications based on the structure of the data and all the associated search functionality inherent in that structure. The BC Laws website itself is an example of one such application.
Please note that you may experience issues when submitting requests to the delivery or test environment if using this OpenAPI specification in other API console viewers.
Please note that you may experience issues when submitting requests to the delivery or test environment if using this OpenAPI specification in other API console viewers.