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Health Repository Provider Specifications for HIU

ndhm.gov.in

Version: 0.5


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Description

The following are the specifications for the APIs to be implemented at the Health Repository end if an entity is only serving the role of a HIU. The specs are essentially duplicates from the Gateway and Bridge, but put together so as to make it clear to HIUs which set of APIs they should implement to participate in the network.
The APIs are organized by the flows - identification, consent flow, data flow and monitoring. They represent the APIs that are expected to be available at the HIU end by the Gateway.
For majority of the APIs, if Gateway has initiated a call, there are corresponding callback APIs on the Gateway. e.g for /consents/hiu/notify API on HIU end, its expected that a corresponding callback API /consents/hiu/on-notify on Gateway is called. Such APIs are organized under the Gateway label.
Gateway relevant APIs for HIUs are grouped under Gateway label. These include the APIs that HIPs are required to call on the Gateway. For example, to request a CM for consent, HIU would call /consent-requests/init API on gateway.
NOTE, in some of the API documentations below, X-HIP-ID is mentioned in header (for example in /auth/on-init). These are the cases, when a particular API is applicable for both HIU and HIP (e.g an entity is playing the role of HRP representing both HIU and HIP). If you are only playing the role of HIP, then only X-HIU-ID header will be sent

Other APIs by ndhm.gov.in

Health Data Consent Manager

Entity which provides health information aggregation services to customers of health care services.
It enables customers to fetch their health information from one or more Health Information Providers
(e.g., Hospitals, Diagnostic Labs, Medical Device Companies), based on their explicit Consent and to share such
aggregated information with Health Information Users i.e. entities in need of such data (e.g., Insurers,
Doctors, Medical Researchers).
Specifications
This document maintains only the Health Information Gateway relevant APIs.
Gateway is the hub that routes/orchestrates the interaction between consent managers and API bridges. There are 5 categories of APIs; discovery, link, consent flow, data flow and monitoring. To reflect the consumers of APIs, the above apis are also categorized under cm facing, hiu facing and hip facing

Health ID Service

It is important to standardize the process of identification of an individual across healthcare providers, to ensure that the created medical records are issued to the right individual or accessed by a Health Information User through appropriate consent.
In order to issue a Health ID to an individual, one only needs basic demographic details like Name, Year of Birth, Gender. In addition, citizens should be able to update contact information easily.

Health Repository Provider Specifications for HIP

The following are the specifications for the APIs to be implemented at the Health Repository end if an entity is only serving the role of a HIP. The specs are essentially duplicates from the Gateway and Health Repository, but put together so as to make it clear to HIPs which set of APIs they should implement to participate in the network.

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The Semantic API uses concepts which are, by definition, terms in The New York Times controlled vocabulary. Like the way facets are used in the Articles API, concepts are a good way to uncover articles of interest in The New York Times archive, and at the same time, limit the scope and number of those articles. The Semantic API maps to external semantic data resources, in a fashion consistent with the idea of linked data. The Semantic API also provides combination and relationship information to other, similar concepts in The New York Times controlled vocabulary.

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BC Laws

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Please note that you may experience issues when submitting requests to the delivery or test environment if using this OpenAPI specification in other API console viewers.

BC Geographical Names Web Service - REST API

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Motor Vehicle Department, Kerala

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CROssBAR Data API

ebi.ac.uk
About CROssBAR & data
CROssBAR: Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations
CROssBAR is a comprehensive system that integrates large-scale biomedical data from various resources e.g UniProt, ChEMBL, Drugbank, EFO, HPO, InterPro & PubChem and stores them in a new NoSQL database, enrich these data with deep learning based prediction of relations between numerous biomedical entities, rigorously analyse the enriched data to obtain biologically meaningful modules and display them to the user via easy to interpret, interactive and heterogeneous knowledge graphs.
CROssBAR platform exposes a set of 12 endpoints to query data stored in the CROssBAR database. These endpoints help the user to find data of interest using different parameters provided by the API endpoint.
For example,
https://www.ebi.ac.uk/tools/crossbar/proteins?accession=A0A023GRW5 -> will provide protein information about accession 'A0A023GRW5' including its interactions, functions, cross-references, variations and more.
https://www.ebi.ac.uk/tools/crossbar/activities?moleculeChemblId=CHEMBL465983 -> will provide ChEMBL bio-interactions related information including targets and bio-activity measurements associated with molecule chembl id 'CHEMBL465983'
Knowledge graphs
Another use case of CROssBAR's API endpoints is in building knowledge graphs. These endpoints can be weaved together (output from one API endpoint fed as input to another API endpoint) programmatically to link nodes like protein, disease, drugs etc. as nodes of the graph. The endpoints are designed to be independent from each other which allows users the flexibility to drive biological networks from any facet e.g drug-centric, disease-centric, gene-centric etc. Our service for knowledge graph construction is available at https://crossbar.kansil.org.
An example for the part of the background queries on the CROssBAR API during the construction of a knowledge graph,
(with the aim of keeping the example simple, we have only included the processes related to pathways, genes/proteins and drugs/compounds)
In this example, we would like to find bio-active compounds (with a pChEMBL value threshold of at least 6.0) & drugs targeting all proteins belonging to "WNT ligand biogenesis and trafficking" pathway (based on Reactome pathway annotations).
This can be achieved by using endpoints listed on this swagger documentation as illustrated in following steps-
Find bio-active compounds (with a pChEMBL value threshold of at least 6.0) & drugs targeting all proteins belonging to "WNT ligand biogenesis and trafficking" pathway (based on Reactome annotations)
This can be achieved by using endpoints listed on this swagger documentation as illustrated in following steps-
Get all proteins from “/proteins” API endpoint which have a reactome pathway name equal to "WNT ligand biogenesis and trafficking".
From the collection of uniprot protein accessions collected from step 1 above, we query “/targets” API endpoint to obtain the ‘targetchemblid’s of these proteins.
From the collection of targetchemblids collected from step 2 above, we query “/activities” API endpoint with pChEMBL value >=6, to obtain the ’moleculechemblid’s of the molecules that we need.
From the collection of uniprot protein accessions collected from step 1 above, we find out Drug names and ids from the “/drugs” API endpoint that targets our proteins.
From the collection of ’moleculechemblid’s obtained in step3, we query “/molecules” endpoint to get the compounds that are interacting with the genes/proteins belonging to the “WNT ligand biogenesis and trafficking” pathway.

BC Data Catalogue API

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Please note that you may experience issues when submitting requests to the delivery or test environment if using this OpenAPI specification in other API console viewers.